Matthai SM, Valson AT, Duhli N, Rupali P, Pulimood AB, Varughese S. Fibrillary glomerulonephritis in a human immunodeficiency virus-positive, hepatitis C-negative Indian patient: Expanding the profile of renal involvement in human immunodeficiency virus infection. Indian J Pathol Microbiol. 2018 Oct-Dec;61(4):610-613. doi: 10.4103/IJPM.IJPM_52_18. PMID: 30303165.

Paul TV, Asha HS, Thomas N, Seshadri MS, Rupali P, Abraham OC, Pulimood SA, Jose A. Hypovitaminosis D and bone mineral density in human immunodeficiency virus-infected men from India, with or without antiretroviral therapy. Endocr Pract. 2010 Jul-Aug;16(4):547-53. doi: 10.4158/EP09197.OR. PMID: 20150027.

Ramakrishna K, Sampath S, Chacko J, Chacko B, Narahari DL, Veerendra HH, Moorthy M, Krishna B, Chekuri V, Raju RK, Shanmugasundaram D, Pichamuthu K, Abraham AM, Abraham O, Thomas K, Mathews P, Varghese GM, Rupali P, Peter JV. Clinical Profile and Predictors of Mortality of Severe Pandemic (H1N1) 2009 Virus Infection Needing Intensive Care: A Multi-Centre Prospective Study from South India. J Glob Infect Dis. 2012 Jul;4(3):145-52. doi: 10.4103/0974-777X.100569. PMID: 23055645; PMCID: PMC3459431.

Ramalingam VV, Demosthenes JP, Ghale BC, Rupali P, Varghese GM, Abraham OC, Kannangai R. Frequency of cross-resistance to rilpivirine and etravirine among HIV-1 subtype C infected individuals failing nevirapine/efavirenz based ART regimen. Infect Dis (Lond). 2019 Jan;51(1):71-74. doi: 10.1080/23744235.2018.1510182. Epub 2018 Oct 29. PMID: 30371136.

George L, Dincy P, Chopra M, Agarwala M, Maheswaran S, Deodhar D, Rupali P, Thomas M, Pulimood S. Novel multidrug therapy for disseminated rhinosporidiosis, refractory to dapsone – case report. Trop Doct. 2013 Jul;43(3):110-2. doi: 10.1177/0049475513493414. PMID: 23796478.

Sudarsanam TD, Rupali P, Tharyan P, Abraham OC, Thomas K. Pre-admission antibiotics for suspected cases of meningococcal disease. Cochrane Database Syst Rev. 2017 Jun 14;6(6):CD005437. doi: 10.1002/14651858.CD005437.pub4. PMID: 28613408; PMCID: PMC6481530.

Matthai SM, Valson AT, Duhli N, Rupali P, Pulimood AB, Varughese S. Fibrillary glomerulonephritis in a human immunodeficiency virus-positive, hepatitis C-negative Indian patient: Expanding the profile of renal involvement in human immunodeficiency virus infection. Indian J Pathol Microbiol. 2018 Oct-Dec;61(4):610-613. doi: 10.4103/IJPM.IJPM_52_18. PMID: 30303165.

Paul TV, Asha HS, Thomas N, Seshadri MS, Rupali P, Abraham OC, Pulimood SA, Jose A. Hypovitaminosis D and bone mineral density in human immunodeficiency virus-infected men from India, with or without antiretroviral therapy. Endocr Pract. 2010 Jul-Aug;16(4):547-53. doi: 10.4158/EP09197.OR. PMID: 20150027.

Ramakrishna K, Sampath S, Chacko J, Chacko B, Narahari DL, Veerendra HH, Moorthy M, Krishna B, Chekuri V, Raju RK, Shanmugasundaram D, Pichamuthu K, Abraham AM, Abraham O, Thomas K, Mathews P, Varghese GM, Rupali P, Peter JV. Clinical Profile and Predictors of Mortality of Severe Pandemic (H1N1) 2009 Virus Infection Needing Intensive Care: A Multi-Centre Prospective Study from South India. J Glob Infect Dis. 2012 Jul;4(3):145-52. doi: 10.4103/0974-777X.100569. PMID: 23055645; PMCID: PMC3459431.

Ramalingam VV, Demosthenes JP, Ghale BC, Rupali P, Varghese GM, Abraham OC, Kannangai R. Frequency of cross-resistance to rilpivirine and etravirine among HIV-1 subtype C infected individuals failing nevirapine/efavirenz based ART regimen. Infect Dis (Lond). 2019 Jan;51(1):71-74. doi: 10.1080/23744235.2018.1510182. Epub 2018 Oct 29. PMID: 30371136.

George L, Dincy P, Chopra M, Agarwala M, Maheswaran S, Deodhar D, Rupali P, Thomas M, Pulimood S. Novel multidrug therapy for disseminated rhinosporidiosis, refractory to dapsone – case report. Trop Doct. 2013 Jul;43(3):110-2. doi: 10.1177/0049475513493414. PMID: 23796478.

Sudarsanam TD, Rupali P, Tharyan P, Abraham OC, Thomas K. Pre-admission antibiotics for suspected cases of meningococcal disease. Cochrane Database Syst Rev. 2017 Jun 14;6(6):CD005437. doi: 10.1002/14651858.CD005437.pub4. PMID: 28613408; PMCID: PMC6481530.

Ramalingam S, Kannangai R, Abraham OC, Subramanian S, Rupali P, Pulimood SA, Jesudason MV, Sridharan G. Chemokine profile among human immunodeficiency virus-1 (HIV-1) infected individuals from southern India. Indian J Med Res. 2008 Feb;127(2):133-9. PMID: 18403790.

Ramalingam S, Kannangai R, Vijayakumar TS, Mathai D, Abraham OC, Subramanian S, Rupali P, Jesudason MV, Sridharan G. Subtype & cytokine profiles of HIV infected individuals from south India. Indian J Med Res. 2005 Apr;121(4):226-34. PMID: 15817940.

Ramalingam S, Kannangai R, Vijayakumar TS, Subramanian S, Abraham OC, Rupali P, Jesudason MV, Sridharan G. Increased number of CCR5+ CD4 T cells among south Indian adults probably associated with the low frequency of X4 phenotype of HIV-1 in India. Indian J Med Res. 2002 Sep;116:90-5. PMID: 12619446.

Rupali P, Abraham OC, Zachariah A, Subramanian S, Mathai D. Aetiology of prolonged fever in antiretroviral-naïve human immunodeficiency virus-infected adults. Natl Med J India. 2003 Jul-Aug;16(4):193-9. PMID: 14606766.

Rupali P, Evangelynn SB, Abraham OC, Korula RJ, Shukla V, Thankachen R, Ponniah M, Subramanian S, Jeyaseelan V, Mathai D. Granulomatous hepatitis following open heart surgery with cardiopulmonary bypass. Natl Med J India. 2008 Sep-Oct;21(5):222-4. PMID: 19320320.

Rupali P, Mannam S, Bella A, John L, Rajkumar S, Clarence P, Pulimood SA, Samuel P, Karthik R, Abraham OC, Mathai D. Risk factors for mortality in a south Indian population on generic antiretroviral therapy. J Assoc Physicians India. 2012 Dec;60:11-4. PMID: 23781664.

Sachithanandham J, Ramamurthy M, Kannangai R, Daniel HD, Abraham OC, Rupali P, Pulimood SA, Abraham AM, Sridharan G. Detection of opportunistic DNA viral infections by multiplex PCR among HIV infected individuals receiving care at a tertiary care hospital in South India. Indian J Med Microbiol. 2009 Jul-Sep;27(3):210-6. doi: 10.4103/0255-0857.53202. PMID: 19584500.

Sadashiv MS, Rupali P, Manesh A, Kannangai R, Abraham OC, Pulimood SA, Karthik R, Rajkumar S, Thomas K. Risk Factors of Clinical and Immunological Failure in South Indian Cohort on Generic Antiretroviral Therapy. J Assoc Physicians India. 2017 Dec;65(12):34-39. PMID: 29327520.

Sivadasan A, Abraham OC, Rupali P, Pulimood SA, Rajan J, Rajkumar S, Zachariah A, Kannangai R, Kandathil AJ, Sridharan G, Mathai D. High rates of regimen change due to drug toxicity among a cohort of South Indian adults with HIV infection initiated on generic, first-line antiretroviral treatment. J Assoc Physicians India. 2009 May;57:384-8. PMID: 19634284.

Srinidhi BV, Fletcher GJ, Sachidanantham J, Rupali P, Ramalingam VV, Demosthenes JP, Abraham OC, Pulimood SA, Rebekah G, Kannangai R. Effect of Interleukin-28B polymorphism on Interleukin-28 expression and immunological recovery amongst HIV-1-infected individuals following antiretroviral therapy. Indian J Med Microbiol. 2017 Oct-Dec;35(4):580-584. doi: 10.4103/ijmm.IJMM_17_299. PMID: 29405153.

Veeraraghavan B, Pragasam AK, Manesh A, Rupali P, Iyadurai R, Rodrigues C, Joshi S, Roy I, Chaudhuri BN, Chitnis DS, Tapan D. Dosing strategy based on prevailing aminoglycoside minimum inhibitory concentration in India: Evidence and issues. Indian J Med Microbiol. 2017 Oct-Dec;35(4):585-587. doi: 10.4103/ijmm.IJMM_17_386. PMID: 29405154.

Mathuram, A. J., Singh, S., Abraham, O. C., Zachariah, A., Rupali, P., Varghese, G. M., Karthik, R. and Clarence, P. Antiretroviral therapy under the national program: Experience of a single large centre in Southern India Journal of Clinical and Diagnostic Research; 2018, 12 (3): OC05-OC07

Kandathil AJ, Kannangai R, Abraham OC, Rupali P, Pulimood SA, Verghese VP, Grant P, Pillay D, Sridharan G. The frequency of HIV-I drug resistance mutations among treatment-naive individuals at a tertiary care centre in south India. Int J STD AIDS. 2009 Aug;20(8):522-6. doi: 10.1258/ijsa.2008.008403. PMID: 19625581.

Suzana S, Ninan MM, Gowri M, Venkatesh K, Rupali P, Michael JS. Xpert MTB/Rif for the diagnosis of extrapulmonary tuberculosis--an experience from a tertiary care centre in South India. Trop Med Int Health. 2016 Mar;21(3):385-92. doi: 10.1111/tmi.12655. Epub 2016 Jan 19. PMID: 26671654.

Joel A, Abhilash KP, Anandan S, Veeraraghavan B, Rupali P. Listeria Meningitis with Disseminated Tuberculosis in a HIV Positive Individual. J Glob Infect Dis. 2013 Jan;5(1):34-5. doi: 10.4103/0974-777X.107175. PMID: 23599618; PMCID: PMC3628234.

Kandathil AJ, Kannangai R, Verghese VP, Pulimood SA, Rupali P, Sridharan G, Grant P, Pillay D, Abraham OC. Drug resistant mutations detected by genotypic drug resistance testing in patients failing therapy in clade C HIV-1 infected individuals from India. Indian J Med Microbiol. 2009 Jul-Sep;27(3):231-6. doi: 10.4103/0255-0857.53205. PMID: 19584504.

Asha HS, Seshadri MS, Paul TV, Abraham OC, Rupali P, Thomas N. Human immunodeficiency virus-associated lipodystrophy: an objective definition based on dual-energy x-ray absorptiometry-derived regional fat ratios in a South Asian population. Endocr Pract. 2012 Mar-Apr;18(2):158-69. doi: 10.4158/EP11139.OR. PMID: 21856599.

Miraclin TA, Mathew BS, Mammen JJ, Ramachandran SV, Kumar S, Bhattacharjee S, Sudarsanam TD, Sathyendra S, Prabhakar Abhilash KP, Jayaseelan V, Rupali P. Slow parasite clearance, absent K13-propeller gene polymorphisms and adequate artesunate levels among patients with malaria: A pilot study from southern India. Natl Med J India. 2019 Jul-Aug;32(4):200-206. doi: 10.4103/0970-258X.291292. PMID: 32769239.

Divyashree S, Nabarro LE, Veeraraghavan B, Rupali P. Enteric fever in India: current scenario and future directions. Trop Med Int Health. 2016 Oct;21(10):1255-1262. doi: 10.1111/tmi.12762. Epub 2016 Sep 8. PMID: 27495900.

Alex D, Raj Williams TI, Sachithanandham J, Prasannakumar S, Demosthenes JP, Ramalingam VV, Victor PJ, Rupali P, Fletcher GJ, Kannangai R. Performance of a Modified In-House HIV-1 Avidity Assay among a Cohort of Newly Diagnosed HIV-1 Infected Individuals and the Effect of ART on the Maturation of HIV-1 Specific Antibodies. Curr HIV Res. 2019;17(2):134-145. doi: 10.2174/1570162X17666190712125606. PMID: 31309891.

Deodhar D, Frenzen F, Rupali P, David D, Promila M, Ramya I, Seshadri MS. Disseminated histoplasmosis: a comparative study of the clinical features and outcome among immunocompromised and immunocompetent patients. Natl Med J India. 2013 Jul-Aug;26(4):214-5. PMID: 24758444.

Paul N, Kannagai R, Robert K, Harikishan B, Rupali P, Abraham OC. A HIPS-mimic. J Intern Med. 2005 Dec;258(6):579-80. doi: 10.1111/j.1365-2796.2005.01574.x. PMID: 16313482.

Rupali P, Abraham OC, Jesudason MV, John TJ, Zachariah A, Sivaram S, Mathai D. Treatment failure in typhoid fever with ciprofloxacin susceptible Salmonella enterica serotype Typhi. Diagn Microbiol Infect Dis. 2004 May;49(1):1-3. doi: 10.1016/j.diagmicrobio.2003.12.002. PMID: 15135492.

Rupali P, Palanikumar P, Shanthamurthy D, Peter JV, Kandasamy S, Zacchaeus NGP, Alexander H, Thangavelu P, Karthik R, Abraham OC, Michael JS, Paul H, Veeraraghavan B, Chacko B, Jeyaseelan V, Alangaden G, Prentiss T, Zervos MJ. Impact of an antimicrobial stewardship intervention in India: Evaluation of post-prescription review and feedback as a method of promoting optimal antimicrobial use in the intensive care units of a tertiary-care hospital. Infect Control Hosp Epidemiol. 2019 May;40(5):512-519. doi: 10.1017/ice.2019.29. PMID: 31084674.

Thuppal SV, Wanke CA, Noubary F, Cohen JT, Mwamburi M, Ooriapdickal AC, Muliyil J, Kang G, Varghese GM, Rupali P, Karthik R, Sathasivam R, Clarance P, Pulimood SA, Peter D, George L. Toxicity and clinical outcomes in patients with HIV on zidovudine and tenofovir based regimens: a retrospective cohort study. Trans R Soc Trop Med Hyg. 2015 Jun;109(6):379-85. doi: 10.1093/trstmh/trv016. Epub 2015 Mar 15. PMID: 25778734; PMCID: PMC4542851.

Carey RA, Rupali P, Abraham OC, Kattula D. Does first line antiretroviral therapy increase the prevalence of cardiovascular risk factors in Indian patients?: A cross sectional study. J Postgrad Med. 2013 Oct-Dec;59(4):258-62. doi: 10.4103/0022-3859.123145. PMID: 24346381.

Purva M, Randeep G, Rajesh M, Mahesh CM, Sunil G, Subodh K, Sushma S, Naveet W, Pramod G, Arti K, Surbhi K, Omika K, Sonal K, Manoj S, Arunaloke C, Pallab R, Manisha B, Neelam T, Priscilla R, Subaramani K, Ebor J, Veeraraghavan B, Camilla R, Vijayalakshmi N, Vibhor T, Kuldeep S, Pradeep KB, Neeraj G, Daisy K, Vimala V, Chiranjay M, Vandana KE, Muralidhar V, Vijayshri D, Ruchita A, Kanne P, Sukanya S, Chand W, Neeraj G, Sanjay B, Sourav S, Karuna T, Saurabh S, Behera B, Sanjeev S, Thirunarayan MA, Reema N, Lahri S, Raja R, Hirak JR, Sujata B, Desma D, Mammen C, Sudipta M, Manas KR, Gaurav G, Swagata T, Satyajeet M, Anupam D, Tushar SM, Bashir AF, Gulnaz B, Shaista N, Sulochana D, Khuraijam RD, Langpoklakpam CS, Padma D, Anudita B, Ujjwala G, Neeta K, Geeta V, Tanvi S, Shristi J, Prachi V, Mamta L, Prithwis B, Anil CP, Clarissa L, Rajni G, Rushika S, Lata K, Vinod O, Kamini W. Assessment of core capacities for antimicrobial stewardship practices in indian hospitals: Report from a multicentric initiative of global health security agenda. Indian J Med Microbiol. 2019 Jul-Sep;37(3):309-317. doi: 10.4103/ijmm.IJMM_19_445. PMID: 32003327.

Korula A, Abraham A, Abubacker FN, Viswabandya A, Lakshmi KM, Abraham OC, Rupali P, Varghese GM, Michael JS, Srivastava A, Mathews V, George B. Invasive fungal infection following chemotherapy for acute myeloid leukaemia-Experience from a developing country. Mycoses. 2017 Oct;60(10):686-691. doi: 10.1111/myc.12646. Epub 2017 Jul 23. PMID: 28736936.

Rupali P. Introduction to Tropical Medicine. Infect Dis Clin North Am. 2019 Mar;33(1):1-15. doi: 10.1016/j.idc.2018.10.011. PMID: 30712755; PMCID: PMC7127597.

Chacko ST, Chandy ST, Abraham OC, Swaminathan S, Varghese GM, Priscilla R, Mathai D. Pacemaker endocarditis caused by Pseudomonas aeruginosa treated successfully. J Assoc Physicians India. 2003 Oct;51:1021-2. PMID: 14719599.

Kannangai R, Ramalingam S, Vijayakumar TS, Vincent AA, Abraham OC, Subramanian S, Rupali P, Mathai D, Jesudason MV, Sridharan G. The immunological and virological response in human immunodeficiency virus type-1 (HIV-1) infected Indian individuals on HAART therapy: a one-year follow up study. Indian J Med Microbiol. 2003 Oct-Dec;21(4):274-6. PMID: 17643043.

Ramalingam S, Kannangai R, Abraham OC, Subramanian S, Rupali P, Pulimood SA, Jesudason MV, Sridharan G. Investigation of apoptotic markers among human immunodeficiency virus (HIV-1) infected individuals. Indian J Med Res. 2008 Dec;128(6):728-33. PMID: 19246796.

Wilder-Smith A, Rupali P. Estimating the dengue burden in India. Lancet Glob Health. 2019 Aug;7(8):e988-e989. doi: 10.1016/S2214-109X(19)30249-9. Epub 2019 Jun 11. PMID: 31201129.

Bakthavatchalam YD, Babu P, Munusamy E, Dwarakanathan HT, Rupali P, Zervos M, John Victor P, Veeraraghavan B. Genomic insights on heterogeneous resistance to vancomycin and teicoplanin in Methicillin-resistant Staphylococcus aureus: A first report from South India. PLoS One. 2019 Dec 30;14(12):e0227009. doi: 10.1371/journal.pone.0227009. PMID: 31887179; PMCID: PMC6936811.

Bandyopadhyay R, Balaji V, Yadav B, Jasmine S, Sathyendra S, Rupali P. Effectiveness of treatment regimens for Typhoid fever in the nalidixic acid-resistant S. typhi (NARST) era in South India. Trop Doct. 2018 Jul;48(3):182-188. doi: 10.1177/0049475518758884. Epub 2018 Mar 1. PMID: 29495943.

Shankar C, Veeraraghavan B, Nabarro LEB, Ravi R, Ragupathi NKD, Rupali P. Whole genome analysis of hypervirulent Klebsiella pneumoniae isolates from community and hospital acquired bloodstream infection. BMC Microbiol. 2018 Jan 8;18(1):6. doi: 10.1186/s12866-017-1148-6. PMID: 29433440; PMCID: PMC5809863.

Manesh A, Meltzer E, Jin C, Britto C, Deodhar D, Radha S, Schwartz E, Rupali P. Typhoid and paratyphoid fever: a clinical seminar. J Travel Med. 2021 Apr 14;28(3):taab012. doi: 10.1093/jtm/taab012. PMID: 33550411.

Ninan MM, Rupali P, James P, Michael JS. Robustness of the Line Probe Assay for the Rapid Diagnosis and Characterization of Mutations in Extensively Drug-Resistant Tuberculosis. Microb Drug Resist. 2019 Jul/Aug;25(6):799-804. doi: 10.1089/mdr.2018.0268. Epub 2019 Mar 5. PMID: 30785833.

Manesh A, Rupali P, Sullivan MO, Mohanraj P, Rupa V, George B, Michael JS. Mucormycosis-A clinicoepidemiological review of cases over 10 years. Mycoses. 2019 Apr;62(4):391-398. doi: 10.1111/myc.12897. Epub 2019 Feb 19. PMID: 30685896.

Subramanian S, Abraham OC, Rupali P, Zachariah A, Mathews MS, Mathai D. Disseminated histoplasmosis. J Assoc Physicians India. 2005 Mar;53:185-9. PMID: 15926599.

Ninan MM, Gowri M, Christopher DJ, Rupali P, Michael JS. The diagnostic utility of line probe assays for multidrug-resistant tuberculosis. Pathog Glob Health. 2016 Jun-Jul;110(4-5):194-9. doi: 10.1080/20477724.2016.1214350. Epub 2016 Aug 8. PMID: 27499239; PMCID: PMC5072114.

Thampy A, Ninan MM, Michael JS, James P, Rupali P. Clinical implications of high-risk mutations in drug resistant tuberculosis (DR-TB): An observational cohort study. Indian J Med Microbiol. 2021 Jun 11:S0255-0857(21)04122-0. doi: 10.1016/j.ijmmb.2021.05.020. Epub ahead of print. PMID: 34127320.

Shanthamurthy D, Manesh A, Zacchaeus NG, Roy LR, Rupali P. Perioperative outcomes in human immunodeficiency virus-infected patients - the PRO HIV study. Int J STD AIDS. 2018 Sep;29(10):968-973. doi: 10.1177/0956462418764485. Epub 2018 Apr 18. PMID: 29669485

Thomas A, Sebastian A, George R, Thomas DS, Rebekah G, Rupali P, Michael JS, Peedicayil A. Abdominal Tuberculosis Mimicking Ovarian Cancer: A Diagnostic Dilemma. J Obstet Gynaecol India. 2020 Aug;70(4):304-309. doi: 10.1007/s13224-020-01322-8. Epub 2020 May 9. PMID: 32764852; PMCID: PMC7381535.

Satayraddi, A., Cherian, K. E., Kapoor, N., Rupali, P. and Paul, T. V. Multiple visceral abscesses in a patient with diabetes mellitus: a rare yet corrigible infection: melioidosis Tropical Doctor; 2018, 48 (1): 54-56 Link

George B, Kulkarni U, Lionel S, Devasia AJ, Aboobacker FN, Lakshmi KM, Selvarajan S, Korula A, Rose W, Varghese GM, Rupali P, Veeraraghavan B, Michael JS, Abraham A, Abraham A, Mathews V. Haploidentical transplantation is feasible and associated with reasonable outcomes despite major infective complications-A single center experience from India. Transplant Cell Ther. 2022 Jan;28(1):45.e1-45.e8. doi: 10.1016/j.jtct.2021.09.020. Epub 2021 Oct 2. PMID: 34607073.

Mammen JJ, Kumar S, Thomas L, Kumar G, Zachariah A, Jeyaseelan L, Peter JV, Agarwal A, Mukherjee A, Chatterjee P, Bhatnagar T, Rasalam JE, Chacko B, Mani T, Joy M, Rupali P, Murugesan M, Daniel D, Latha B, Bundas S, Kumar V, Dosi R, Khambholja JR, de Souza R, Chander BT, Bahadur S, Dube S, Suri A, Jindal A, Shrivastav O, Barge V, Bajpayee A, Malhotra P, Singh N, Tambe M, Sharma N, Bhat S, Kaulgud RS, Gurtoo A, Reddy DH, Upadhyay K, Jain A, Patel TC, Nagori I, Jha PR, Babu KVS, Aparna C, Panjwani SJ, Natarajan M, Baldi M, Khadke VK, Dua S, Singh R, Sharma A, Sharma J, Gokhale YA, Yadav PD, Sapkal G, Kaushal H, Kumar VS. Factors associated with mortality among moderate and severe patients with COVID-19 in India: a secondary analysis of a randomised controlled trial. BMJ Open. 2021 Oct 4;11(10):e050571. doi: 10.1136/bmjopen-2021-050571. PMID: 34607865; PMCID: PMC8491003.

Gupta A, Goyal-Honavar A, Jonathan GE, Prabhu K, Varghese GM, Rupali P, Chacko AG. Adapting management strategies for sellar-suprasellar lesions during the COVID-19 pandemic: a pragmatic approach from the frontline. Br J Neurosurg. 2021 Jun 21:1-8. doi: 10.1080/02688697.2021.1940852. Epub ahead of print. PMID: 34148450.

Turner P, Rupali P, Opintan JA, Jaoko W, Feasey NA, Peacock SJ, Ashley EA. Laboratory informatics capacity for effective antimicrobial resistance surveillance in resource-limited settings. Lancet Infect Dis. 2021 Jun;21(6):e170-e174. doi: 10.1016/S1473-3099(20)30835-5. Epub 2021 Apr 15. PMID: 33865461.

Leder K, Borwein S, Chanthavanich P, Chatterjee S, Htun K, Marma ASP, Nakatani I, Ok JJ, Pakasi L, Pandey P, Piyaphanee W, Rupali P, Schwartz E, Shinozuka T, Phu PTH, Watanabe H, Visser J, Wilder-Smith A, Zhang M, McGuinness SL. Travel medicine perspectives of select travel medicine experts practicing in the Asia-Pacific region. J Travel Med. 2017 Jul 1;24(4). doi: 10.1093/jtm/tax012. PMID: 28426112.

Manesh A, Balaji V, Kumar DR, Rupali P. A case of clinical and microbiological failure of azithromycin therapy in Salmonella enterica serotype Typhi despite low azithromycin MIC. Int J Infect Dis. 2017 Jan;54:62-63. doi: 10.1016/j.ijid.2016.11.409. Epub 2016 Nov 25. PMID: 27894983.

Manesh A, Moorthy M, Bandopadhyay R, Rupali P. HIV-associated sub-acute sclerosing panencephalitis - an emerging threat? Int J STD AIDS. 2017 Aug;28(9):937-939. doi: 10.1177/0956462416687675. Epub 2017 Jan 11. PMID: 28077023.

Abhilash KPP, Mathiyalagan P, Krishnaraj VRK, Selvan S, Kanagarajan R, Reddy NP, Rajendiran N, Hazra D, Gunasekaran K, Moorthy M, Jasmine S, Davis JP, George T, George K, Varghese GM, Rupali P, Barney Isaac TJ, Gupta R, Pichamuthu K, Joy M, Jayaseelan L, Mathews P, Peter JV. Impact of prior vaccination with CovishieldTM and Covaxin® on mortality among symptomatic COVID-19 patients during the second wave of the pandemic in South India during April and May 2021: a cohort study. Vaccine. 2022 Feb 10:S0264-410X(22)00157-8. doi: 10.1016/j.vaccine.2022.02.023. Epub ahead of print. PMID: 35168837; PMCID: PMC8828422.

Basnyat B, Qamar FN, Rupali P, Ahmed T, Parry CM. Enteric fever. BMJ. 2021 Feb 26;372:n437. doi: 10.1136/bmj.n437. PMID: 83363748; PMCID: PMC7907991.

Katyal S, Srivastav S, Katoch O, Rodrigues C, Rupali P, Chakrabarti A, Ray P, Biswal M, Tak V, Nath R, Mukhopadhyay C, Bhattacharya S, Padmaja K, Deotale V, Venkatesh V, Wattal C, Ma T, Nag VL, Ray R, Behera B, Baveja S, Karuna T, Singh SK, Fomda B, Devi SK, Das P, Khandelwal N, Verma P, Thangavelu P, Nazir S, Eshwara VK, Varma M, Mishra TS, Das RR, Malhotra R, Walia K, Guleria R, Mathur P. A self-reported survey on the implementation of infection prevention and control elements in Indian hospitals, part of a HAI surveillance network: Results from 23 hospitals conducting a standardized IPC assessment. Am J Infect Control. 2022 May 13:S0196-6553(22)00410-2. doi: 10.1016/j.ajic.2022.04.014. Epub ahead of print. PMID: 35577058.

Ramalingam VV, Fletcher GJ, Kasirajan A, Demosthenes JP, Rupali P, Varghese GM, Pulimood SA, Rebekah G, Kannangai R. Can in-house HIV-2 viral load assay be a reliable alternative to commercial assays for clinical and therapeutic monitoring? Curr HIV Res. 2022 Jun 9. doi: 10.2174/1570162X20666220609155237. Epub ahead of print. PMID: 35692165.

Steve RJ, Alex D, Yesudhason BL, Prakash JAJ, Mathews NS, Daniel D, Ramalingam VV, Demosthenes JP, Ghale BC, Anantharam R, Rebekah G, Rupali P, Varghese GM, Kannangai R. Autoantibodies Among HIV-1 Infected Individuals and the Effect of Anti-Retroviral Therapy (ART) on It. Curr HIV Res. 2021;19(3):277-285. doi: 10.2174/1570162X19666210217120337. PMID: 33596809.

George AJ, Thomas C, Mathew DE, Jesudasan MR, Abraham OC, Rupali P, Singh B, Samuel R, Gaikwad P, Moorthy M. Viral RNA in peritoneal, rectal, and blood samples from surgical patients with COVID-19. Br J Surg. 2022 Jun 17:znac045. doi: 10.1093/bjs/znac045. Epub ahead of print. PMID: 35714204.

Isaac BTJ, Priya N, Nair AA, Thangakunam B, Balachandran A, George T, Thomas SM, George TK, Iyadurai R, Kumar SS, Zachariah A, Singh B, Rupali P, Pichamuthu K, Gupta R, Daniel J, Sasikumar JR, Chandy ST, Christopher DJ. Treatment of COVID-19 Acute Respiratory Distress Syndrome With a Tabletop Noninvasive Ventilation Device in a Respiratory Intermediate Care Unit. Mayo Clin Proc Innov Qual Outcomes. 2022 Jun;6(3):239-249. doi: 10.1016/j.mayocpiqo.2022.04.001. Epub 2022 Apr 19. PMID: 35463482; PMCID: PMC9015959.

Murugesan M, Mathews P, Paul H, Karthik R, Mammen JJ, Rupali P. Protective effect conferred by prior infection and vaccination on COVID-19 in a healthcare worker cohort in South India. PLoS One. 2022 May 20;17(5):e0268797. doi: 10.1371/journal.pone.0268797. PMID: 35594270; PMCID: PMC9122209.

Katoch O, Katyal S, Srivastav S, Rodrigues C, Rupali P, Chakrabarti A, Ray P, Tak V, Biswal M, Nath R, Mukhopadhyay C, Bhattacharya S, Padmaja K, Deotale V, Venkatesh V, Wattal C, Ma T, Nag VL, Ray R, Behera B, Baveja S, Karuna T, Singh SK, Fomda B, Devi SK, Das P, Khandelwal N, Verma P, Gaind R, Bhattacharyya P, Kumar P, Srivastava A, Iravane J, Majumdar T, Sharma R, Sankara D, Kalwaje Eshwara V, Varma M, Nazir S, Tripathy S, Mishra S, Dey A, Thangavelu P, Kapoor L, Malhotra R, Walia K, Guleria R, Mathur P. Self-reported survey on infection prevention and control structures in healthcare facilities part of a national level healthcare associated infection surveillance network in India, 2019. Am J Infect Control. 2022 Apr;50(4):390-395. doi: 10.1016/j.ajic.2021.09.019. Epub 2021 Sep 30. PMID: 34600081.

Korula P, Alexander H, John JS, Kirubakaran R, Singh B, Tharyan P, et al. Favipiravir for treating COVID-19. Cochrane Database of Systematic Reviews. [Review]. 2022;2 022(5). Link

Murugesan M, Venkatesan P, Ramasamy J, Samuel P, Karthik R, Rose W, Rupali P. Transmission Dynamics of COVID-19 and Utility of Contact Tracing in Risk Assessment of Health-Care Worker Exposure during COVID-19 Pandemic. Indian J Community Med. 2022 Jan-Mar;47(1):82-86. doi: 10.4103/ijcm.ijcm_1097_21. Epub 2022 Mar 16. PMID: 35368479; PMCID: PMC8971878.

Rupali P, Patel D, Chandrasekar P. Voriconazole toxicity masquerading as septic shock. Leuk Lymphoma. 2015 Apr;56(4):1170-1. doi: 10.3109/10428194.2014.955023. PMID: 25139693.

Ninan MM, Rupali P, Varghese GM, Shalini EB, Venkatesh K, Jesudason MR, Rebekah G, Michael JS. Xpert Ultra in diagnosing extrapulmonary TB: accuracy and trace calls. Int J Tuberc Lung Dis. 2022 May 1;26(5):441-445 . doi: 10.5588/ijtld.21.0480. PMID: 35505481.

Giri A, Karkey A, Dongol S, Arjyal A, Maharjan A, Veeraraghavan B, Paudyal B, Dolecek C, Gajurel D, Phuong DNT, Thanh DP, Qamar F, Kang G, Hien HV, John J, Lawson K, Wolbers M, Hossain MS, Sharifuzzaman M, Luangasanatip N, Maharjan N, Olliaro P, Rupali P, Shakya R, Shakoor S, Rijal S, Qureshi S, Baker S, Joshi S, Ahmed T, Darton T, Bao TN, Lubell Y, Kestelyn E, Thwaites G, Parry CM, Basnyat B. Azithromycin and cefixime combination versus azithromycin alone for the out-patient treatment of clinically suspected or confirmed uncomplicated typhoid fever in South Asia: a randomised controlled trial protocol. Wellcome Open Res. 2021 Nov 12;6:207. doi: 10.12688/wellcomeopenres.16801.2. PMID: 35097222; PMCID: PMC8772527.

Tharakan SJ, Peter Cv D, Karthik R, Rupa V, Rose W, Thomas M, Manuel M, Rupali P, Pulimood S, Rao Ajjampur SS. Case Report: A Single-Center Case Series on Skin Manifestations of Leishmaniasis from a Non-Endemic State in Southern India. Am J Trop Med Hyg. 2020 Dec 29;104(3):928-933. doi: 10.4269/ajtmh.20-0938. PMID: 33377447; PMCID: PMC7941818.

Chandy GM, Hazra D, Rupali P, Abhilash KPP. Changes in the Emergency Department Dynamics during COVID‑19 Pandemic. Medical Journal of Dr. D.Y. Patil Vidyapeeth ¦ 2022 Jul-Aug:15;4:467-71.

George B, Kulkarni U, Lionel S, Devasia AJ, Aboobacker FN, Lakshmi KM, Selvarajan S, Korula A, Rose W, Varghese GM, Rupali P, Veeraraghavan B, Michael JS, Abraham A, Abraham A, Mathews V. Haploidentical transplantation is feasible and associated with reasonable outcomes despite major infective complications-A single center experience from India. Transplant Cell Ther. 2022 Jan;28(1):45.e1-45.e8. doi: 10.1016/j.jtct.2021.09.020. Epub 2021 Oct 2. PMID: 34607073.

Mathur P, Malpiedi P, Walia K, Srikantiah P, Gupta S, Lohiya A, Chakrabarti A, Ray P, Biswal M, Taneja N, Rupali P, Balaji V, Rodrigues C, Lakshmi Nag V, Tak V, Venkatesh V, Mukhopadhyay C, Deotale V, Padmaja K, Wattal C, Bhattacharya S, Karuna T, Behera B, Singh S, Nath R, Ray R, Baveja S, Fomda BA, Sulochana Devi K, Das P, Khandelwal N, Verma P, Bhattacharyya P, Gaind R, Kapoor L, Gupta N, Sharma A, VanderEnde D, Siromany V, Laserson K, Guleria R; Indian Healthcare Associated Infection Surveillance Network collaborators. Health-care-associated bloodstream and urinary tract infections in a network of hospitals in India: a multicentre, hospital-based, prospective surveillance study. Lancet Glob Health. 2022 Sep;10(9):e1317-e1325. doi: 10.1016/S2214-109X(22)00274-1. PMID: 35961355.

Bansal SB, Ramasubramanian V, Prasad N, Saraf N, Soman R, Makharia G, Varughese S, Sahay M, Deswal V, Jeloka T, Gang S, Sharma A, Rupali P, Shah DS, Jha V, Kotton CN. South Asian Transplant Infectious Disease Guidelines for Solid Organ Transplant Candidates, Recipients, and Donors. Transplantation. 2023 Feb 7. doi: 10.1097/TP.0000000000004521. Epub ahead of print. PMID: 36749281.

Murugesan M, Venkatesan P, Kumar S, Thangavelu P, Rose W, John J, Castro M, Manivannan T, Mohan VR, Rupali P. Epidemiological investigation of the COVID-19 outbreak in Vellore district in South India using Geographic Information Surveillance (GIS). Int J Infect Dis. 2022 Sep;122:669-675. doi: 10.1016/j.ijid.2022.07.010. Epub 2022 Jul 8. PMID: 35811075; PMCID: PMC9263687.

Murugesan M, Venkatesan P, Kumar S, Thangavelu P, Rose W, John J, Castro M, Manivannan T, Mohan VR, Rupali P. Epidemiological investigation of the COVID-19 outbreak in Vellore district in South India using Geographic Information Surveillance (GIS). Int J Infect Dis. 2022 Sep;122:669-675. doi: 10.1016/j.ijid.2022.07.010. Epub 2022 Jul 8. PMID: 35811075; PMCID: PMC9263687.

Murugesan M, Venkatesan P, Kumar S, Thangavelu P, Rose W, John J, Castro M, Manivannan T, Mohan VR, Rupali P. Epidemiological investigation of the COVID-19 outbreak in Vellore district in South India using Geographic Information Surveillance (GIS). Int J Infect Dis. 2022 Sep;122:669-675. doi: 10.1016/j.ijid.2022.07.010. Epub 2022 Jul 8. PMID: 35811075; PMCID: PMC9263687.

Rose W, Raju R, Babji S, George A, Madhavan R, Leander Xavier JV, David Chelladurai JS, Nikitha OS, Deborah AA, Vijayakumar S, Immanuel S, John J, Rupali P, Abhilash KPP, Mohan VR, Tallapaka KB, Samuel P, Kang G. Immunogenicity and safety of homologous and heterologous booster vaccination of ChAdOx1 nCoV-19 (COVISHIELD™) and BBV152 (COVAXIN®): a non-inferiority phase 4, participant and observer-blinded, randomised study. Lancet Reg Health Southeast Asia. 2023 Jan 24:100141. doi: 10.1016/j.lansea.2023.100141. Epub ahead of print. PMID: 36712811; PMCID: PMC9870748.

Sucharita PB, S RY, Basker MM, Verghese VP, Jeyaseelan V, Rupali P, Clarence P. Effect of Nutritional Supplementation on Illness Outcome in Adolescents with HIV on HAART: A Randomized, Double-Blind Clinical Trial. Indian J Pediatr. 2022 Jun 30. doi: 10.1007/s12098-022-04195-z. Epub ahead of print. PMID: 35771346.

Christopher DJ, Isaac BT, Rupali P, Thangakunam B. Health-care preparedness and health-care worker protection in COVID-19 pandemic. Lung India. 2020 May-Jun;37(3):238-245. doi: 10.4103/lungindia.lungindia_189_20. PMID: 32367846; PMCID: PMC7353937.

Ninan MM, Venkatesan M, Balaji V, Rupali P, Michael JS. Pulmonary nocardiosis: Risk factors and species distribution from a high burden centre. Indian J Med Microbiol. 2022 Oct-Dec;40(4):582-584. doi: 10.1016/j.ijmmb.2022.08.010. Epub 2022 Sep 8. PMID: 36088197.

Prasannakumar P, Gadde AB, Bansal SB, Rupali P. Expert Group Opinion for Respiratory Infections in Solid Organ Transplant Recipients in South Asia Indian Journal of Transplantation; 2022, 16 (5): 98-105. doi:10.4103/ijot.ijot_85_21 .

Ninan MM, Rupali P, Varghese GM, Shalini EB, Venkatesh K, Jesudason MR, Rebekah G, Michael JS. Xpert Ultra in diagnosing extrapulmonary TB: accuracy and trace calls. Int J Tuberc Lung Dis. 2022 May 1;26(5):441-445. doi: 10.5588/ijtld.21.0480. PMID: 35505481.

Alexander H, Gunasekaran K, Sara John J, Gracelin Princy Zacchaeus N, Samuel P, Jasmine S, Devasahayam Jesudas Christopher, Pichamuthu K, Rupali P. Evaluation of Remdesivir to the outcomes of hospitalized patients with COVID-19 infection in a tertiary-care hospital in southern India. J Infect Dev Ctries. 2023 Mar 31;17(3):304-310. doi: 10.3855/jidc.16642. PMID: 37023432.

George B, Moorthy M, Kulkarni U, Selvarajan S, Rupali P, Christopher DJ, Balamugesh T, Rose W, Lakshmi KM, Devasia AJ, Fouzia NA, Korula A, Lionel S, Abraham A, Mathews V. Single Dose of Ivermectin is not Useful in Patients with Hematological Disorders and COVID-19 Illness: A Phase II B Open Labelled Randomized Controlled Trial. Indian J Hematol Blood Transfus. 2022 May 27:1-8. doi: 10.1007/s12288-022-01546-w. Epub ahead of print. PMID: 35669353; PMCID: PMC9135993.

Prabhakar Abhilash KP, James RI, Paul HE, Murugesan M, Abraham DT, Christopher J, Valsan A, Mammen JJ, Rupali P, Jesudoss I, Selvan S, Mathews P, Peter JV. Effectiveness of a monitored home isolation program for COVID-19 infection during the second wave of the pandemic. Med J Armed Forces India. 2022 Sep 2. doi: 10.1016/j.mjafi.2022.06.022. Epub ahead of print. PMID: 36068859; PMCID: PMC9437766.

Kapoor N, Audsley J, Rupali P, Sasadeusz J, Paul TV, Thomas N, Lewin SR. A gathering storm: HIV infection and nonalcoholic fatty liver disease in low and middle-income countries. AIDS. 2019 Jun 1;33(7):1105-1115. doi: 10.1097/QAD.0000000000002161. PMID: 31045941.

Gupta A, Goyal-Honavar A, Jonathan GE, Prabhu K, Varghese GM, Rupali P, Chacko AG. Adapting management strategies for sellar-suprasellar lesions during the COVID-19 pandemic: a pragmatic approach from the frontline. Br J Neurosurg. 2021 Jun 21:1-8. doi: 10.1080/02688697.2021.1940852. Epub ahead of print. PMID: 34148450.

Yamuna Devi Bakthavatchalam, Karthick Vasudevan, ShomaVinay Rao, Santosh Varughese, Priscilla Rupali, Maki Gina, Marcus Zervos, John Victor Peter, Balaji Veeraraghavan, Genomic portrait of community-associated methicillin-resistant Staphylococcus aureus ST772-SCCmec V lineage from India, Gene Reports, Volume 24, 2021, 101235, ISSN 2452-0144, https://doi.org/10.1016/j.genrep.2021.101235. https://www.sciencedirect.com/science/article/pii/S245201442100220X)

Kandathil AJ, Kannangai R, David S, Nithyanandam G, Solomon S, Balakrishnan P, Abraham OC, Subramanian S, Rupali P, Verghese VP, Pulimood S, Sridharan G. Comparison of Microcapillary Cytometry Technology and Flow Cytometry for CD4+ and CD8+ T-Cell Estimation. Clin Diagn Lab Immunol. 2005 Aug;12(8):1006-9. doi: 10.1128/CDLI.12.8.1006-1009.2005. PMID: 16085920; PMCID: PMC1182191.

Ramalingam VV, Subramanian S, Fletcher GJ, Rupali P, Varghese G, Pulimood S, Jeyaseelan L, Nandagopal B, Sridharan G, Kannangai R. Interaction of human immunodeficiency virus-1 and human immunodeficiency virus-2 capsid amino acid variants with human tripartite motif 5α protein SPRY domain and its association with pathogenesis. I ndian J Med Microbiol. 2019 Oct-Dec;37(4):574-583. doi: 10.4103/ijmm.IJMM_20_109. PMID: 32436883.

Thampy A, Ninan MM, Michael JS, James P, Rupali P. Clinical implications of high-risk mutations in drug resistant tuberculosis (DR-TB): An observational cohort study. Indian J Med Microbiol. 2021 Oct-Dec;39(4):534-536. doi: 10.1016/j.ijmmb.2021.05.020. Epub 2021 Jun 12. PMID: 34127320.

Rajendra A, Sabnis K, Jeyaseelan V, Rupali P. Paradoxical reaction (PR) in tuberculous lymphadenitis among HIV-negative patients: retrospective cohort study. Postgrad Med J. 2016 Nov;92(1093):684-685. doi: 10.1136/postgradmedj-2016-134326. Epub 2016 Sep 16. PMID: 27638382.

Satayraddi A, Cherian KE, Kapoor N, Rupali P, Paul TV. Multiple visceral abscesses in a patient with diabetes mellitus: a rare yet corrigible infection: melioidosis. Trop Doct. 2018 Jan;48(1):54-56. doi: 10.1177/0049475516689539. Epub 2017 Jan 29. PMID: 28134016.

Abhilash KPP, Mathiyalagan P, Krishnaraj VRK, Selvan S, Kanagarajan R, Reddy NP, Rajendiran N, Hazra D, Gunasekaran K, Moorthy M, Jasmine S, Davis JP, George T, George K, Varghese GM, Rupali P, Barney Isaac TJ, Gupta R, Pichamuthu K, Joy M, Jayaseelan L, Mathews P, Peter JV. Impact of prior vaccination with CovishieldTM and Covaxin® on mortality among symptomatic COVID-19 patients during the second wave of the pandemic in South India during April and May 2021: a cohort study. Vaccine. 2022 Mar 18;40(13):2107-2113. doi: 10.1016/j.vaccine.2022.02.023. Epub 2022 Feb 10. PMID: 35168837; PMCID: PMC8828422.

Miraclin TA, Matthew A, Rupali P. Decreased response to artemisinin combination therapy in falciparum malaria: A preliminary report from South India. Trop Parasitol. 2016 Jan-Jun;6(1):85-6. doi: 10.4103/2229-5070.175125. PMID: 26998439; PMCID: PMC4778189.

Manesh A, Rupali P, Sullivan MO, Mohanraj P, Rupa V, George B, Michael JS. Mucormycosis-A clinicoepidemiological review of cases over 10 years. Mycoses. 2019 Apr;62(4):391-398. doi: 10.1111/myc.12897. Epub 2019 Feb 19. PMID: 30685896.

George AJ, Thomas C, Mathew DE, Jesudasan MR, Abraham OC, Rupali P, Singh B, Samuel R, Gaikwad P, Moorthy M. Viral RNA in peritoneal, rectal, and blood samples from surgical patients with COVID-19. Br J Surg. 2022 Jul 15;109(8):772. doi: 10.1093/bjs/znac045. PMID: 35714204.

Rupali P, Garg D, Viggweswarupu S, Sudarsanam TD, Jeyaseelan V, Abraham OC. Etiology of Classic Fever of Unknown Origin (FUO) among Immunocompetent Indian Adults. J Assoc Physicians India. 2019 Jan;67(1):21-26. PMID: 30935167.

Kannangai R, David S, Sundaresan VC, Sachithanandham J, Mani M, Abraham OC, Pulimood SA, Rupali P, Sridharan G. Frequency of transmitted drug resistance mutations among treatment-naïve HIV-1-infected individuals at a tertiary care centre in South India. Mol Diagn Ther. 2015 Oct;19(5):273-5. doi: 10.1007/s40291-015-0160-5. PMID: 26296335.

Baliga PR, Anantharam R, Thomas V, Rupali P, Chopra M, Pulimood S, Lionel J, Peedicayil A, Kannangai R, Gnanamony M, Abraham P. Evaluating the PGMY-centre hospitalier universitaire vaudois assay as a cost-effective tool for human papillomavirus genotyping in HIV-infected women. Indian J Med Microbiol. 2019 Oct-Dec;37(4):542-548. doi: 10.4103/ijmm.IJMM_20_101. PMID: 32436878.

Shankar C, Nabarro LE, Anandan S, Ravi R, Babu P, Munusamy E, Jeyaseelan V, Rupali P, Verghese VP, Veeraraghavan B. Extremely High Mortality Rates in Patients with Carbapenem-resistant, Hypermucoviscous Klebsiella pneumoniae Blood Stream Infections. J Assoc Physicians India. 2018 Dec;66(12):13-16. PMID: 31313543.

Upreti G, Thomas R, Sundaresan R, Rebekah G, Rupali P, Jasper A. Clinico-Radiological Evaluation for Longitudinal Assessment in Central Skull Base Osteomyelitis: Proposal of Novel Scoring System. Indian J Otolaryngol Head Neck Surg. 2023 Dec;75(4):3553-3564. doi: 10.1007/s12070-023-03956-2. Epub 2023 Jul 4. PMID: 37974699; PMCID: PMC10646027.

Granerod J, Huang Y, Davies NWS, Sequeira PC, Mwapasa V, Rupali P, Michael BD, Solomon T, Easton A. Global Landscape of Encephalitis: Key Priorities to Reduce Future Disease Burden. Clin Infect Dis. 2023 Nov 30;77(11):1552-1560. doi: 10.1093/cid/ciad417. PMID: 37436770; PMCID: PMC10686956.

Zacchaeus NGP, Palanikumar P, Alexander H, Webster J, Nair IK, Sadanshiv M, Thomas RM, Deodhar D, Samuel P, Rupali P. Establishing an effective antimicrobial stewardship program at four secondary-care hospitals in India using a hub-and-spoke model. Antimicrob Steward Healthc Epidemiol. 2023 Jun 9;3(1):e99. doi: 10.1017/ash.2023.171. PMID: 37396191; PMCID: PMC10311688.

Ajjampur SSR, Mankad S, Manuel M, Ruth R, Prabakaran AD, Janagaraj V, David T, Joseph P, Rupali P. Evaluation of Molecular Assays for Diagnosis of Amoebic Liver Abscess in India with Bayesian Latent Class Analysis. Am J Trop Med Hyg. 2024 Jul 23;111(4):791-795. doi: 10.4269/ajtmh.23-0492. PMID: 39043162; PMCID: PMC11448513.

T AM, Singh B, Rupali P. Central nervous system infections in the tropics. Curr Opin Infect Dis. 2024 Jun 1;37(3):201-210. doi: 10.1097/QCO.0000000000001015. Epub 2024 Mar 26. PMID: 38529912.

Jacob A, John JS, Alexander H, George B, Selvarajan S, Samuel P, Nagayazhini R, Karthik R, Rupali P. A study on the effectiveness of an antifungal stewardship program in immunocompromised patients in a tertiary-care teaching hospital: The antifungal stewardship (TAFS) study. Indian J Med Microbiol. 2025 May-Jun;55:100865. doi: 10.1016/j.ijmmb.2025.100865. Epub 2025 Apr 26. PMID: 40294871.

Alex D, Steve RJ, Ramalingam VV, Demosthenes JP, Vijayalakshmi G, Ghale BC, Rupali P, Varghese GM, Daniel D, Rebekah G, Fletcher GJ, Abraham P, Kannangai R. Prevalence and potential impact of human pegivirus-1 on HIV-1 disease progression among Indian PLHIV. J Infect Dev Ctries. 2024 Jul 29;18(7):1108-1117. doi: 10.3855/jidc.19397. PMID: 39078797.

Satyakumar S, Kumar P, Rupali P, Anoop S, Banerjee D, Jebasingh FK, Shyamasunder AH, Rebekah G, Thomas N. Follow-up of phenotype and metabolic changes in adult males living with HIV on combination antiretroviral therapy (CART) for a decade. Sci Rep. 2025 Jul 14;15(1):25373. doi: 10.1038/s41598-025-08083-2. PMID: 40659679; PMCID: PMC12259901. Link